Gene
col14a1a
- ID
- ZDB-GENE-030131-9889
- Name
- collagen, type XIV, alpha 1a
- Symbol
- col14a1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Acts upstream of or within basement membrane assembly and fin regeneration. Located in basement membrane. Is expressed in several structures, including integument; median fin fold; nervous system; pectoral fin bud; and pharyngeal arch. Human ortholog(s) of this gene implicated in esophagus squamous cell carcinoma. Orthologous to human COL14A1 (collagen type XIV alpha 1 chain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 19 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb382 (14 images)
- cb542 (23 images)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Bader et al., 2013
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002035 | von Willebrand factor, type A |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR048287 | Thrombospondin-like, N-terminal domain |
| Family | IPR050525 | Extracellular Matrix Assembly and Organization |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR036465 | von Willebrand factor A-like domain superfamily |
| Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Collagen triple helix repeat | Concanavalin A-like lectin/glucanase domain superfamily | Extracellular Matrix Assembly and Organization | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin-like fold | Thrombospondin-like, N-terminal domain | von Willebrand factor A-like domain superfamily | von Willebrand factor, type A |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9P888 | InterPro | 1840 | |||||||||
| UniProtKB:A0A8M9PDJ1 | InterPro | 1763 | |||||||||
| UniProtKB:F1R9Y1 | InterPro | 1864 | |||||||||
| UniProtKB:A0A8M3AHX6 | InterPro | 1794 | |||||||||
| UniProtKB:A0A8M3AQF5 | InterPro | 1796 | |||||||||
| UniProtKB:A0A8M9PMX9 | InterPro | 1762 | |||||||||
| UniProtKB:A0A8M3AIZ5 | InterPro | 1879 | |||||||||
| UniProtKB:A0AB32T6Q6 | InterPro | 1878 | |||||||||
| UniProtKB:A0AB32T822 | InterPro | 1795 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
col14a1a-201
(1)
|
Ensembl | 5,595 nt | ||
| mRNA |
col14a1a-202
(1)
|
Ensembl | 6,466 nt | ||
| mRNA |
col14a1a-203
(1)
|
Ensembl | 947 nt | ||
| mRNA |
col14a1a-204
(1)
|
Ensembl | 530 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-col14a1a | polyclonal | Rabbit |
|
2 |
Plasmids
No data available