Gene

col14a1a

ID
ZDB-GENE-030131-9889
Name
collagen, type XIV, alpha 1a
Symbol
col14a1a Nomenclature History
Previous Names
  • cb542 (1)
  • col14a1
  • cb382 (1)
  • sb:cb382
  • sb:cb542
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Involved in basement membrane assembly. Localizes to basement membrane. Is expressed in several structures, including integument; median fin fold; nervous system; pectoral fin bud; and pharyngeal arch. Orthologous to human COL14A1 (collagen type XIV alpha 1 chain).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
19 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Bader et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With col14a1a Human Ortholog
No data available
Associated With col14a1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002035 von Willebrand factor, type A
Domain IPR003961 Fibronectin type III
Domain IPR048287 Thrombospondin-like, N-terminal domain
Family IPR050525 Extracellular Matrix Assembly and Organization
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR036116 Fibronectin type III superfamily
Homologous_superfamily IPR036465 von Willebrand factor A-like domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length Collagen triple helix repeat Concanavalin A-like lectin/glucanase domain superfamily Extracellular Matrix Assembly and Organization Fibronectin type III Fibronectin type III superfamily Immunoglobulin-like fold Thrombospondin-like, N-terminal domain von Willebrand factor A-like domain superfamily von Willebrand factor, type A
UniProtKB:A0A8M9P888 1840
UniProtKB:A0A8M9PDJ1 1763
UniProtKB:F1R9Y1 1864
UniProtKB:A0A8M3AHX6 1794
UniProtKB:A0A8M3AQF5 1796
UniProtKB:A0A8M9PMX9 1762
UniProtKB:A0A8M3AIZ5 1879
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA col14a1a-201 (1) Ensembl 5,595 nt
mRNA col14a1a-202 (1) Ensembl 6,466 nt
mRNA col14a1a-203 (1) Ensembl 947 nt
mRNA col14a1a-204 (1) Ensembl 530 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-col14a1a polyclonal Rabbit
  • IHC
  • WB
2
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations