Gene

smc4

ID
ZDB-GENE-020419-21
Name
structural maintenance of chromosomes 4
Symbol
smc4 Nomenclature History
Previous Names
  • cb788
  • chunp6901
  • fb99b10
  • MC4 structural maintenance of chromosomes 4-like 1
  • smc4l1 (1)
  • wu:fb99b10 (1)
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to have ATP binding activity. Predicted to be involved in chromosome organization. Predicted to localize to chromosome and nucleus. Is expressed in several structures, including digestive system; nervous system; optic cup; otic vesicle; and pectoral fin. Orthologous to human SMC4 (structural maintenance of chromosomes 4).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smc4 Human Ortholog
No data available
Associated With smc4 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003395 RecF/RecN/SMC, N-terminal
Domain IPR010935 SMCs flexible hinge
Family IPR024704 Structural maintenance of chromosomes protein
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR036277 SMCs flexible hinge superfamily
Domain Details Per Protein
Protein Length P-loop containing nucleoside triphosphate hydrolase RecF/RecN/SMC, N-terminal SMCs flexible hinge SMCs flexible hinge superfamily Structural maintenance of chromosomes protein
UniProtKB:E7FGC2 1289
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smc4-201 (1) Ensembl 4,193 nt
ncRNA smc4-002 (1) Ensembl 766 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations