ZFIN ID: ZDB-GENE-020419-21

Mapping Details

Gene Name:	structural maintenance of chromosomes 4
Symbol:	smc4

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	15	1,573,568 - 1,612,468	GRCz12tu
NCBI Map Viewer	15	1,573,568 - 1,612,468	GRCz12tu
Ensembl	15	1,534,644 - 1,573,129	GRCz11
NCBI Map Viewer	15	1,534,625 - 1,573,130	GRCz11
UCSC	15	-	GRCz11
Vega	15	1,569,735 - 1,608,220	GRCv10

Mapped Clones containing smc4
CH211-196B13	Chr: 15 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi1143Tg	15	1,535,011 - 1,535,012	GRCz11	DIRECT		ZFIN Curated Data
sa35784	15	1,591,303	GRCz12tu	DIRECT		Sealy et al., 2025
	15	1,551,965	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	15	1,587,056	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	15	1,547,171	Zv9	DIRECT		Busch-Nentwich et al., 2013
hi1143Tg	15		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa35784	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	15		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	15		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
15	7.3 cM	smc4l1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Chr 15

Golling et al., 2002

Adam Amsterdam (pers. comm.) reports that smc4l1 is mapped to LG15 on the T51 mapping panel.

Markers Encoded by smc4
chunp6901 Chr: 15 Details