ZFIN ID: ZDB-GENE-020419-15
Gene Name: protein phosphatase 1, regulatory subunit 10
Gene Symbol: ppp1r10    Nomenclature History

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Previous Names: ppp1r10l (1), CHUNP6885, fe15d12, fk54b08, wu:fe15d12, wu:fk54b08

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Predicted to localize to the nucleus. Orthologous to human PPP1R10 (protein phosphatase 1 regulatory subunit 10).
Genome Resources: Alliance (1),  Gene:192329 (1),  Ensembl(GRCz11):ENSDARG00000032651 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55802]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi694Tg Transgenic Insertion Unknown Unknown DNA
la010879Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: Fig. for (hi694) from Phenotype Annotation (1994-2006)
    Observed in:
    DISEASE ASSOCIATED WITH ppp1r10 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ppp1r10 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000571 Zinc finger, CCCH-type
    Domain IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
    Domain IPR017923 Transcription factor IIS, N-terminal
    Homologous_superfamily IPR035441 TFIIS/LEDGF domain superfamily
    Homologous_superfamily IPR036855 Zinc finger, CCCH-type superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ppp1r10-202 (1)    Ensembl 3723
    ppp1r10-203 (1)    Ensembl 3961
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ppp1r10 No data available
    MARKER RELATIONSHIPS
    ppp1r10 Contained in: [BAC] CH211-201M19 (1), CH211-215A10 (1)
    ppp1r10 Encodes: [EST] fe15d12, fk54b08
    [STS] chunp6885
    [cDNA] MGC:55802 (1), MGC:192755 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212568 (1) 3738 bp
    Genomic GenBank:BX547939 (1) 215708 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A3KPX4 (1) 794 aa
    Sequence Information (all 30)
    ORTHOLOGY for ppp1r10 ( Chr: 19 )
    CITATIONS (30)