Gene

cldn3c

ID
ZDB-GENE-010328-8
Name
claudin 3c
Symbol
cldn3c Nomenclature History
Previous Names
  • cldnh (1)
  • fc56d05
  • wu:fc56d05 (1)
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to have structural molecule activity. Predicted to localize to bicellular tight junction; integral component of membrane; and plasma membrane. Is expressed in several structures, including brain; hatching gland; pleuroperitoneal region; prechordal plate; and sensory system. Orthologous to human CLDN3 (claudin 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
33 figures from 10 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
17 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cldn3c Human Ortholog
No data available
Associated With cldn3c Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017974 Claudin, conserved site
Family IPR003549 Claudin-3
Family IPR004031 PMP-22/EMP/MP20/Claudin
Family IPR006187 Claudin
Domain Details Per Protein
Protein Length Claudin Claudin-3 Claudin, conserved site PMP-22/EMP/MP20/Claudin
UniProtKB:Q90XR0 214
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cldnh-201 (1) Ensembl 2,018 nt
mRNA cldnh-202 (1) Ensembl 652 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-cldn3c polyclonal Rabbit
  • IHC
1
Ab2-cldn3 monoclonal IgG2b Mouse
  • IHC
  • WB
Novus Biologicals, LLC
2
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations