Gene

coil

ID

ZDB-GENE-000330-8

Name

coilin p80

Symbol

coil Nomenclature History

Previous Names

CLN80 (1)
wu:fb08h11 (1)

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have U1 snRNA binding activity and U2 snRNA binding activity. Involved in Cajal body organization and spliceosomal snRNP assembly. Predicted to localize to Cajal body. Is expressed widely. Orthologous to human COIL (coilin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from 4 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:56008 (1 image)
eu83 (1 image)
IMAGE:7162766 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 5 figures from Strzelecka et al., 2010
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With coil Human Ortholog

No data available

Associated With coil Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR031722	Coilin, N-terminal domain
Family	IPR024822	Coilin

Domain Details Per Protein

Protein	Length	Coilin	Coilin, N-terminal domain
UniProtKB:B0S7K8 InterPro	532

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	coil-201 (1) Ensembl	Ensembl		2,109 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-coil	polyclonal	coil		Rabbit	IHC		3

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations