FIGURE

Figure 6

ID

ZDB-FIG-210811-13

Publication

Mishra et al., 2021 - Identification of Rhythmically Expressed LncRNAs in the Zebrafish Pineal Gland and Testis

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Figure 6

Multiple sequence alignment and three-dimensional structures predicted by (PS)2-v2: protein structure prediction server for the highly conserved lncRNA-encoded peptides among zebrafish, humans, and mice. Pineal gland lncRNA-encoded peptides (A?L) and testis lncRNA-encoded peptides (M?P). The asterisk symbols (A,E,I,M) depict the identical amino acids among the peptides encoded by zebrafish lncRNAs (ZFLNCT01316_1, ZFLNCT17094_10, ZFLNCT19216_1, and DANIO_RERIO_NEWGENE_8529_1), as well as their corresponding mouse orthologs (BF470940.1_Mouse, BX515373_mouse, GH454583_mouse, and CB521528.1_Mouse) and human orthologs (AV726556_human, DA433582_human, DA369397_human, and BU146414.1_Human). The 3D models of the peptides (B?D,F?H,J?L,N?P) represent the conservation of ?-helix (pink or purple motif structure), ?-strand (yellow layered band), and random coils (white or blue thread) among zebrafish, humans, and mice with known domains from the Protein Data Bank, such as, B (2adcA), C (2adcA), D (2adcA), F (1nkpB), G (1nkpB), H (1nkpB), J (1wyoA), K (1wyoA), L (1wyoA), N (1u19A), O (2vt4B), and P (1xioA).

Expression Data

Expression Detail

Antibody Labeling

Phenotype Data

Phenotype Detail

Acknowledgments

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