Genomic Feature
kgs1
- ID
- ZDB-ALT-201130-1
- Name
- kgs1
- Synonyms
-
- NPY-07 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Shiozaki Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 19: 20113630 - 20113636 (GRCz11) (1) Details
- Nucleotide change
- CCAAGCA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CTGTCAAAACATTTAAAGAAACAATTGTTGATTTCCTCTCGTCAGTAATTAATTTAATAAGGAAATTCACCAGTTCATTTTTGTAAGTACAAAATCACACCCTGCTGTTTCAACTCGTGAGAGAAACGCTTTTAAAGCACCGCGTAGGGCGCAGTTAATTAGAAACGCGGTGGGGTTTTATCTAAAGGATTAATACCTTGCTTCCGAAAAGAAAGAAAATGAACTATGTGATGTTTGTCCAGTCAACAGCTGCCGCAGTGCCACTTAAGAACATTTAAATGCTAAAACTGCAGTTCAAAATAAATTCATGGCGTTTTGAGGACAGAAACACTTGAGGAAGAATTTGAGACTACGCTAATATTACAAACGAGGAGCTCACCTCTGCCTTGTTATGAGGTTGATGTAGTGTCTTAGTGCTGAATAATACTTGGCGAGCTCCTCCGCAGGTGCGTCCTCTCCCGGGTTGTCGGGCTTTGTTGGATACCCTTCTGTGAGAGTCC
CCAAGCA/- GACGAACAAGAGAAACGCGCACGCTGCCCAGCTCATCCACATCTTCATGTTTGGATTCATCTGCAATTAAACAAAGCAAACGTGTTTGTGCTGATGCGCAATTTATTGTTCCAAAAAGTGATAAAAATAAAAACTGTTGAATTATAGTGTGCAAAAATCTATAAATGATAGCGCTTCTGTCATTAAAAACTTAATACCGATGTTTAATAATACTAAAAGAAACATTCTGAAAGAATGCAATACTTTCTTAAAATATTGAAACAATTTCAATAAAGTGTCTAAACAAAGGAAAATAATATTTGAAAGGTTGAACTTACCAGTGAATGAGGTCTTGGAATTTTTTGAGGTCTTGATTGGAATTCTTGCTCTGTGGGTGTCGACTTCCCAGATTTTCTGCATTCAGAGTCGTGCGTCTTCTGGTTTTATACCTGTACTGCTCGTGCCATAAAGAGCAGAGCCCACGCGCAATTGCGCGCGACTCTTTTGATGCGCGCGAGCCC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| npykgs1/kgs1 | Homozygous | ♀+/- ♂+/- | 3 figures  from Shiozaki et al., 2020 | 2 figures from Shiozaki et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None