Genomic Feature
nub23
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 50788503 - 50788509 (GRCz11) (1) Details
- Nucleotide change
- GGGCGCT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TCATTACAGGCCGTCTGCAGTTAGTCTTGCTGCTTTATTGCAGTCTTACACTGGCACAACAGAAGTTCTGCTTGTAGGGACACTACAGTTGTCCGCTCTTCAACACACATTACCACTCTTTATATCTCCTCTGATCATCAAACATGTCCTGTGAACAGTGTGTGTAGAGCGAGAGCAGTTCCACACACATACACATACACACACACACACACACACACACACACACACACACACACACATGCGTTACACTAGACGTGTGTTCTGTCAGGCGTGTGTTCGTGTGTGTTGTGTGTTCAGCAGTGTAGCTGGCGCTCTTGCTTCATGTATTAATGCTGCGTGTCTGCAGATAAAGCACAGAGTCCGTGTGTGTGACGAACACGCGTGTCCACTGTGGTCTGAGGGTTAATCCGCAGGCTGATGTTCTGGCTCTGTTCTGGTCTTCAGGTCTTCAGCGACGCGTTTCCGCTGGATCCAGAGCTACTATCAGGAGCAGGACGAGT
GGGCGCT/- GGACGACATCTACATCGGGCAGCAGTGTCCACAGATGTGCCACGGCCACGGCTGGTGCGATCATGGACACTGCAGGTCAGTAACACACACACACACCGCCGACACACTGATGAGTCTCAAGCCGGATCTCCTGATGCTGAGATCTCCTAATGCTCTGCTGTTTCTCTGATTCTGTCTACATGAGCTCCTCATCCAGAGACAGCTTCTGCAGATGAGGGAGACGCCACACTTCAGTTTGAATACACACACACTCTAATGTTGCTGAGTGTGTGTGTGTGTGTGTGTAAGAGGCTGATGTTGGCATGTGTCGGGCTTCACACACTACAGCACGTGTCTGCAGTGAGTGCTGGAGCAGACCCTGACCCGGGTTAGAGAGCACAGATGATCTGCAGCGCTTCATCACTGCGTGTGGATGACATGAGATCAGTGCTGACGCGCACCGCTGAGCTTTATTACACTCCACACCATAAATGATGAGCAGGAGACCAGGCGGCCTTCAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| relnnub23/nub23 (AB) | Homozygous | ♀+/- ♂+/- | 4 figures  from Nimura et al., 2019 | 5 figures from Nimura et al., 2019 | |
| relnnub23/nub23; nkhspGFFDMC28CEt; nkuasgfp1aTg (AB) | Complex | Fig. 3 from Nimura et al., 2019 | Fig. 3 from Nimura et al., 2019 | ||
| relnnub23/nub23; nkhspGFFDMC156AEt; nkuasgfp1aTg (AB) | Complex | Fig. 4 from Nimura et al., 2019 | Fig. 4 from Nimura et al., 2019 | ||
| relnnub23/nub23; nkSAGFFLF251AEt; nkuasgfp1aTg (AB) | Complex | Fig. 5 from Nimura et al., 2019 | Fig. 5 from Nimura et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None
- Hosaka, S., Hosokawa, M., Hibi, M., Shimizu, T. (2024) The zebrafish cerebellar neural circuits are involved in orienting behavior. eNeuro. 11(10):
- Nimura, T., Itoh, T., Hagio, H., Hayashi, T., Di Donato, V., Takeuchi, M., Itoh, T., Inoguchi, F., Sato, Y., Yamamoto, N., Katsuyama, Y., Del Bene, F., Shimizu, T., Hibi, M. (2019) Role of Reelin in cell positioning in the cerebellum and the cerebellum-like structure in zebrafish. Developmental Biology. 455(2):393-408
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