Genomic Feature
ihb172
- ID
- ZDB-ALT-170612-2
- Name
- ihb172
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Gui Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 15: 7057251 - 7057255 (GRCz11) (1) Details
- Nucleotide change
- AGGCC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TGACTTCAACAGACTTCTGCACCTGCTTTACGAACTAATTATGTCTTCTAAACTGTGTCGGTTTCCAGTTGTTAGTTCAATTGTTGTGATGAGAGACATAGTTTATGAATTTATGAAGCGAAATAGATTAGTCGCTTTCCAGGCATACGAATCAGGAAGATTTATGTCGTACTGCATCAAATATGTGTGAATGTGAGGGAGTGGGAGGAAGAGAAGGCGGGATTAGAAAAACCGAACCACAATTTGCCCTCCTTCTCCAGGGGTATCTAGTTAAGAAACTCTGAAGAGCAGCAGCTTGCAAAACCTTTAACGCTGATATTAAGCTCCACAAATAGGTCTAACCTACAAAAAACACTGGGAAGGTAAAGAAAATATCTGTACATGACTCCAAACGGACGATTTTACTGCCATCGAAATAACATTGGTTTGCAAAACTTGAATTTTTATTAAGTGATTTTGTTTTGGTATAGGTTTGCGTGCGCAATGATGGCCACCTACCC
AGGCC/- ACGAGGATAACGGCATGATACTCATGGACACAACCTCGAGTTCAGCGGAGAAAGACCGAACAAAAGACGAAGCTCCTCCAGAGAAGGGACCGGACAAATCCGACCCGACCCAGAAACCACCGTACTCATACGTGGCGTTAATCGCGATGGCAATCCGCGAGAGCTCGGAGAAGCGTCTTACGCTGTCCGGTATATACCAGTACATCATCAGTAAGTTTCCATTCTACGAGAAGAACAAGAAGGGATGGCAGAACAGCATCCGACACAACCTGTCACTCAACGAGTGCTTCATCAAGGTGCCTCGGGAGGGCGGCGGTGAGCGAAAGGGCAACTACTGGACCCTGGATCCTGCATGCGAGGATATGTTTGAAAAGGGCAACTACCGGCGAAGACGACGAATGAAAAGACCGTTCAGGCCTCCACCGACCCATTTCCAGCCAGGCAAATCTCTCTTTGGCGGTGAAGGGTACGGTTACCTCTCCCCGCCCAAATACCTACAG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| foxl2aihb172/ihb172 (AB) | Homozygous | ♀+/- ♂+/- | 5 figures from 2 publications | 7 figures from 2 publications | |
| foxl2aihb172/ihb172; foxl2bihb173/ihb173 (AB) | Complex | 4 figures from 2 publications | 4 figures from 2 publications |
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Supplemental Information
- Genotyping protocol
- None
- Zhou, J., Yang, Y.J., Gan, R.H., Wang, Y., Li, Z., Zhang, X.J., Gui, J.F., Zhou, L. (2022) Foxl2a and Foxl2b are involved in midbrain-hindbrain boundary development in zebrafish. Gene expression patterns : GEP. 46:119286
- Yang, Y.J., Wang, Y., Li, Z., Zhou, L., Gui, J.F. (2017) Sequential, Divergent, and Cooperative Requirements of Foxl2a and Foxl2b in Ovary Development and Maintenance of Zebrafish.. Genetics. 205(4):1551-1572
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