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General Information
ZIRC
ZFIN: Gene: sod1
ZFIN ID: ZDB-GENE-990415-258

Gene Name:superoxide dismutase 1, soluble
Gene Symbol: sod1
Previous Names: Cu/Zn-SOD(1) , ZSOD(1) , cuzn, sod(Cu/Zn)(1)
Nomenclature History


GENE EXPRESSION:(current status)
All expression data: 14 figure(s) from 6 publications
Directly submitted expression data: 5 figure(s) (1 images) from Thisse et al., 2004 [IMAGE:7137288]
Wild Type Stages, Structures: Zygote:1-cell (0.00h-0.75h) to Adult (90d-730d, breeding adult)
  brain, gill ... (all 6)
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Phenotype: (current status)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Biological Process response to metal ion (more)
Cellular Component cytoplasm
Molecular Function superoxide dismutase activity (more)
All GO Terms (10)

Protein Families, Domains and Sites:
  • InterPro:IPR001424 (1)
  • InterPro:IPR018152 (1)
  • PROSITE:PS00087 (1)
  • PROSITE:PS00332 (1)
  • Pfam:PF00080 (1)
  • EC:1.15.1.1 (1)
  • Loading Transcript Data...

    Gene Product Description


    SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    sod1 Contained in [BAC] DKEY-50P8 (1)    (order this)
    sod1 Encodes [EST] IMAGE:7137288 (1)    (order this)
    [cDNA] MGC:66152 (1)    (order this) , MGC:192309 (1)    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131294 (1) 761 bp
    Genomic GenBank:AL837524 (1) 202158 bp
    Polypeptide UniProtKB:O73872 (1) 154 aa
    Sequence Clusters UniGene:75822 (1)
    All Sequence Information (11)

    OTHER  sod1  GENE / MARKER PAGES:

  • Entrez Gene:30553 (1)
  • VEGA:OTTDARG00000019505 (1)
  • Ensembl(Zv8):ENSDARG00000043848 (1)

  • MAPPING INFORMATION:
      LG:  10  Details

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA
    Zebrafish sod1  10
    Human SOD1  21 (q22.11)
  • OMIM:147450
  • Entrez Gene:6647
  • Mouse Sod1  16 (61.00 cM)
  • MGI:98351
  • Entrez Gene:20655
  • Fruit fly Sod  3L
  • FLYBASE:FBgn0003462
  • Entrez Gene:39251
  • Orthology Details

    CITATIONS   (21)