Gene

hoxd9a

ID
ZDB-GENE-990415-121
Name
homeobox D9a
Symbol
hoxd9a Nomenclature History
Previous Names
  • hoxd9
  • z-28
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in embryonic skeletal system morphogenesis; positive regulation of transcription by RNA polymerase II; and regionalization. Predicted to localize to nucleus. Is expressed in mesenchyme; pectoral fin; pectoral fin bud; somite; and visual system. Orthologous to human HOXD9 (homeobox D9).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
13 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hoxd9a Human Ortholog
No data available
Associated With hoxd9a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR006711 Hox9, N-terminal activation domain
Domain IPR020479 Homeodomain, metazoa
Family IPR017112 Homeobox protein HXA9/HXB9/HXC9
Family IPR050803 Abd-B homeobox transcription factor
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Abd-B homeobox transcription factor Homedomain-like superfamily Homeobox, conserved site Homeobox protein HXA9/HXB9/HXC9 Homeodomain Homeodomain, metazoa Hox9, N-terminal activation domain
UniProtKB:Q9PWM6 262
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hoxd9a-201 (1) Ensembl 1,407 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations