ZFIN is now using GRCz12tu for Genomic Data
Gene
spag1b
- ID
- ZDB-GENE-061013-512
- Name
- sperm associated antigen 1b
- Symbol
- spag1b Nomenclature History
- Previous Names
-
- zgc:153288
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in female organism. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 28. Orthologous to human SPAG1 (sperm associated antigen 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Newman et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| primary ciliary dyskinesia 28 | Alliance | Ciliary dyskinesia, primary, 28 | 615505 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Ciliary Assembly and Mitochondrial Import | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat |
|---|---|---|---|---|---|
| UniProtKB:Q08BM1 | InterPro | 591 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
spag1b-201
(1)
|
Ensembl | 1,713 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers