Gene
cdhr1a
- ID
- ZDB-GENE-040924-4
- Name
- cadherin-related family member 1a
- Symbol
- cdhr1a Nomenclature History
- Previous Names
-
- cdhr1
- pcdh21
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Description
- Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Human ortholog(s) of this gene implicated in cone-rod dystrophy 15. Orthologous to human CDHR1 (cadherin related family member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from Piedade et al., 2020
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| cone-rod dystrophy 15 | Alliance | Cone-rod dystrophy 15 | 613660 |
| cone-rod dystrophy 15 | Alliance | Macular dystrophy, retinal | 613660 |
| cone-rod dystrophy 15 | Alliance | Retinitis pigmentosa 65 | 613660 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Cadherin | Cadherin conserved site | Cadherin-like | Cadherin-like superfamily |
|---|---|---|---|---|---|
|
UniProtKB:A0A8M9PXT0
|
749 | ||||
|
UniProtKB:Q6B3P0
|
857 | ||||
|
UniProtKB:G1K2I7
|
855 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cdhr1a-201
(1)
|
Ensembl | 4,844 nt | ||
| mRNA |
cdhr1a-202
(1)
|
Ensembl | 3,862 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-cdhr1a | polyclonal | IgG | Rabbit |
|
Boster Biological
|
2 |
Plasmids
No data available