Gene

cdhr1a

ID
ZDB-GENE-040924-4
Name
cadherin-related family member 1a
Symbol
cdhr1a Nomenclature History
Previous Names
  • cdhr1
  • pcdh21
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Involved in glial cell development and retina development in camera-type eye. Predicted to localize to integral component of plasma membrane. Human ortholog(s) of this gene implicated in cone-rod dystrophy 15. Orthologous to human CDHR1 (cadherin related family member 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Charlton-Perkins et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cdhr1a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Cone-rod dystrophy 15 613660
Macular dystrophy, retinal 613660
Retinitis pigmentosa 65 613660
Associated With cdhr1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020894 Cadherin conserved site
Domain IPR002126 Cadherin-like
Family IPR039808 Cadherin
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin Cadherin conserved site Cadherin-like Cadherin-like superfamily
UniProtKB:A0A8M9PXT0 749
UniProtKB:Q6B3P0 857
UniProtKB:G1K2I7 855
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA cdhr1a-201 (1) Ensembl 4844 nt
mRNA cdhr1a-202 (1) Havana 3862 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations