ZFIN ID: ZDB-GENE-040611-1

Gene Name:neuropilin 1b
Gene Symbol: nrp1b

Nomenclature History

---

GENE EXPRESSION:(current status)

All expression data:	5 figure(s) from 5 publications
Wild Type Stages, Structures:	Segmentation:5-9 somites (11.66h-14.00h) to Larval:Protruding-mouth (72.00h-96.00h, 3.5mm)
	unspecified
Curated microarray expression:	GEO  (1)

---

MUTANTS AND TARGETED KNOCKDOWNS:

Mutant line(s):   3 genotypes
Allele(s):   fh278, fh279, unrec_nrp1b

Phenotype: (current status)

Knockdown reagents: MO1-nrp1b (1) ,   MO2-nrp1b (1)

---

GENE PRODUCTS:

Gene Ontology

Ontology	GO Term
Biological Process	angiogenesis (more)
Cellular Component	membrane
Molecular Function	protein binding

All GO Terms (6)

Protein Families, Domains and Sites:

InterPro:IPR000421 (1) InterPro:IPR000859 (1) InterPro:IPR000998 (1) InterPro:IPR008979 (1) InterPro:IPR014648 (1)

PROSITE:PS01180 (1) PROSITE:PS01285 (1) PROSITE:PS01286 (1) PROSITE:PS50022 (1) PROSITE:PS50060 (1)

Pfam:PF00431 (1) Pfam:PF00629 (1) Pfam:PF00754 (1)

Gene Product Description

---

SEGMENT (CLONE AND PROBE) RELATIONSHIPS:

nrp1b Contained in	[BAC] DKEY-218A22 (1)    (order this)
nrp1b Encodes	[cDNA] MGC:158182 (1)    (order this)

---

SEQUENCE INFORMATION:

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_205674 (1)	4633 bp	- Select Tool - ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX088727 (1)	185178 bp	- Select Tool - MegaBLAST Ensembl
Polypeptide	UniProtKB:A3KNA2 (1)	959 aa	- Select Tool - ZFIN BLAST Ensembl SIB BLAST
Sequence Clusters	UniGene:132331 (1)
All Sequence Information (16)

---

OTHER  nrp1b  GENE / MARKER PAGES:

Entrez Gene:402973 (1)

VEGA:OTTDARG00000019989 (1)

Ensembl(Zv8):ENSDARG00000027290 (1)

---

MAPPING INFORMATION:

LG:  2    Details

---

ORTHOLOGY:

				Evidence
Species	Symbol	Chromosome (Position)	Accession #	AA	CL
Zebrafish	nrp1b	2
Human	NRP1	10 (p12)	OMIM:602069 Entrez Gene:8829
Mouse	Nrp1	8 (73.00 cM)	MGI:106206 Entrez Gene:18186
Orthology Details

---

CITATIONS   (20)