ZFIN is now using GRCz12tu for Genomic Data
Gene
atad5b
- ID
- ZDB-GENE-030131-338
- Name
- ATPase family AAA domain containing 5b
- Symbol
- atad5b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA binding activity and DNA clamp unloader activity. Acts upstream of or within positive regulation of RIG-I signaling pathway. Predicted to be active in nucleus. Is expressed in several structures, including eye; female organism; heart; liver; and pleuroperitoneal region. Orthologous to human ATAD5 (ATPase family AAA domain containing 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | AAA+ ATPase domain | ATPase, AAA-type, core | P-loop containing nucleoside triphosphate hydrolase |
|---|---|---|---|---|---|
| UniProtKB:A0A8M1NDC2 | InterPro | 1063 | |||
| UniProtKB:A0A0R4IQJ5 | InterPro | 1060 | |||
| UniProtKB:Q6PFI7 | InterPro | 1060 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
atad5b-201
(1)
|
Ensembl | 429 nt | ||
| mRNA |
atad5b-202
(1)
|
Ensembl | 3,932 nt | ||
| mRNA |
atad5b-203
(1)
|
Ensembl | 7,192 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers