Research
General Information
ZIRC
ZFIN: Gene: chsy1
ZFIN ID: ZDB-GENE-030131-3127

Gene Name:chondroitin sulfate synthase 1
Gene Symbol: chsy1
Previous Names: wu:fc27h06, chys1, wu:fc27h05, zgc:64191
Nomenclature History


GENE EXPRESSION:(current status)
Directly submitted expression data: 6 figure(s) (10 images) from Thisse et al., 2004 [MGC:64191]
Wild Type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.00h-60.00h)
  apical ectodermal ridge pectoral fin bud, epidermis ... (all 10)
Curated microarray expression: GEO  (1)

MUTANTS AND TARGETED KNOCKDOWNS:
Phenotype: (current status)
Knockdown reagent: MO1-chsy1 (1)

GENE PRODUCTS:

Gene Ontology
Ontology GO Term
Cellular Component Golgi cisterna membrane
Molecular Function transferase activity, transferring hexosyl groups
All GO Terms (2)

Protein Families, Domains and Sites:
  • InterPro:IPR008428 (1)
  • Pfam:PF05679 (1)

  • SEGMENT (CLONE AND PROBE) RELATIONSHIPS:
    chsy1 Encodes [EST] fc27h05 , fc27h06 (1)
    [cDNA] MGC:64191 (1)    (order this)

    SEQUENCE INFORMATION:
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212678 (1) 3982 bp
    Polypeptide UniProtKB:Q6P296 (1) 801 aa
    Sequence Clusters UniGene:78655 (1)
    All Sequence Information (10)

    OTHER  chsy1  GENE / MARKER PAGES:

  • Entrez Gene:324407 (1)
  • Ensembl(Zv8):ENSDARG00000079027 (1)

  • MAPPING INFORMATION:
      LG:  7    Details

    ORTHOLOGY:
      Evidence
    Species Symbol Chromosome (Position) Accession # AA
    Zebrafish chsy1  7
    Human CHSY1  15 (q26.3)
  • OMIM:608183
  • Entrez Gene:22856
  • Orthology Details

    CITATIONS   (13)