ZFIN is now using GRCz12tu for Genomic Data
Gene
slc27a6
- ID
- ZDB-GENE-060825-27
- Name
- solute carrier family 27 member 6
- Symbol
- slc27a6 Nomenclature History
- Previous Names
-
- zgc:153783
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable long-chain fatty acid transmembrane transporter activity and long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid import into cell and long-chain fatty acid metabolic process. Predicted to be active in endoplasmic reticulum membrane and plasma membrane. Orthologous to human SLC27A6 (solute carrier family 27 member 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020845 | AMP-binding, conserved site |
| Domain | IPR000873 | AMP-dependent synthetase/ligase domain |
| Domain | IPR025110 | AMP-binding enzyme, C-terminal domain |
| Homologous_superfamily | IPR042099 | ANL, N-terminal domain |
| Homologous_superfamily | IPR045851 | AMP-binding enzyme domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | AMP-binding, conserved site | AMP-binding enzyme, C-terminal domain | AMP-binding enzyme domain superfamily | AMP-dependent synthetase/ligase domain | ANL, N-terminal domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q0P3V6 | InterPro | 470 | |||||
| UniProtKB:A0A8M1NBM6 | InterPro | 618 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc27a6-201
(1)
|
Ensembl | 2,173 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers