ZFIN is now using GRCz12tu for Genomic Data
Gene
susd1
- ID
- ZDB-GENE-060526-169
- Name
- sushi domain containing 1
- Symbol
- susd1 Nomenclature History
- Previous Names
-
- si:ch211-29n12.1 (1)
- si:ch73-247j11.2
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Unknown
- Description
- Predicted to enable calcium ion binding activity. Predicted to be involved in epithelial cell differentiation and system development. Predicted to be located in membrane. Orthologous to human SUSD1 (sushi domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
| Domain | IPR000436 | Sushi/SCR/CCP domain |
| Domain | IPR000742 | EGF-like domain |
| Domain | IPR001881 | EGF-like calcium-binding domain |
| Domain | IPR049883 | NOTCH1, EGF-like calcium-binding domain |
| Domain | IPR057598 | Receptor-type tyrosine-protein phosphatase U-like, Fn3 domain |
| Family | IPR051622 | Receptor-type Tyrosine-protein Phosphatases |
| Homologous_superfamily | IPR009030 | Growth factor receptor cysteine-rich domain superfamily |
| Homologous_superfamily | IPR035976 | Sushi/SCR/CCP superfamily |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
Domain Details Per Protein
| Protein | Additional Resources | Length | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | Fibronectin type III superfamily | Growth factor receptor cysteine-rich domain superfamily | NOTCH1, EGF-like calcium-binding domain | Receptor-type Tyrosine-protein Phosphatases | Receptor-type tyrosine-protein phosphatase U-like, Fn3 domain | Sushi/SCR/CCP domain | Sushi/SCR/CCP superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1QRX3 | InterPro | 575 | |||||||||||
| UniProtKB:A0A8M9PYC1 | InterPro | 528 | |||||||||||
| UniProtKB:A0A8M3ARY2 | InterPro | 935 | |||||||||||
| UniProtKB:A0AB32TNR5 | InterPro | 924 | |||||||||||
| UniProtKB:A0AB32TNS8 | InterPro | 815 | |||||||||||
| UniProtKB:A0AC58JNH8 | InterPro | 815 | |||||||||||
| UniProtKB:A0AC58JNI0 | InterPro | 755 | |||||||||||
| UniProtKB:A0AC58JNI7 | InterPro | 935 | |||||||||||
| UniProtKB:A0AC58JNJ0 | InterPro | 476 | |||||||||||
| UniProtKB:A0AC58JNJ2 | InterPro | 575 | |||||||||||
| UniProtKB:A0AC58JNJ3 | InterPro | 575 | |||||||||||
| UniProtKB:A0AC58JNM4 | InterPro | 755 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance