Gene

sycp3

ID
ZDB-GENE-040910-2
Name
synaptonemal complex protein 3
Symbol
sycp3 Nomenclature History
Previous Names
  • sycp3l
  • zgc:136951
Type
protein_coding_gene
Location
Chr: 25 Mapping Details/Browsers
Description
Predicted to be involved in meiotic cell cycle and spermatid development. Predicted to localize to synaptonemal complex. Human ortholog(s) of this gene implicated in spermatogenic failure 4. Is expressed in germ line cell and reproductive system. Orthologous to several human genes including SYCP3 (synaptonemal complex protein 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
45 figures from 26 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sycp3 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
spermatogenic failure 4 Alliance Pregnancy loss, recurrent, 4 270960
spermatogenic failure 4 Alliance Spermatogenic failure 4 270960
Associated With sycp3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006888 XLR/SYCP3/FAM9 domain
Family IPR051443 X-linked Lymphocyte-regulated/Synaptonemal Complex Protein 3
Domain Details Per Protein
Protein Length X-linked Lymphocyte-regulated/Synaptonemal Complex Protein 3 XLR/SYCP3/FAM9 domain
UniProtKB:Q1RLP7 240
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sycp3-201 (1) Ensembl 1,220 nt
mRNA sycp3-202 (1) Ensembl 574 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-sycp3 polyclonal Rabbit
  • IHC
  • WB
7
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations