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General Information
ZIRC
ZFIN ID: ZDB-GENE-040910-2
Gene Name: synaptonemal complex protein 3
Gene Symbol: sycp3
Sequence Ontology ID : SO:0000704

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Previous Names: sycp3l, zgc:136951

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in meiotic cell cycle and spermatid development. Predicted to localize to the synaptonemal complex. Human ortholog(s) of this gene implicated in spermatogenic failure 4.  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32527 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44282 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sycp3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    spermatogenic failure 4 Pregnancy loss, recurrent, 4 270960
    Spermatogenic failure 4 270960
    DISEASE ASSOCIATED WITH sycp3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process meiotic cell cycle (more)
    Cellular Component lateral element (more)
    Molecular Function molecular_function (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006888 (1)
  • Pfam:PF04803 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sycp3-201 (1) 1220
    sycp3-202 (1) 574
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sycp3 No data available
    MARKER RELATIONSHIPS
    sycp3Contained in: [BAC] CH211-59O9 (1) (order this)
    sycp3Encodes: [cDNA] MGC:136951 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001040350 (1) 1237bp
    Genomic GenBank:CR385081 (1) 182806bp
    Select Tool
    Polypeptide UniProtKB:Q1RLP7 (1) 240aa
    Sequence Clusters UniGene:15474 (1)
    Sequence Information (all 11)
    ORTHOLOGY for sycp3 (Chr: 25)
    CITATIONS (51)