Gene

tfe3a

ID
ZDB-GENE-010919-2
Name
transcription factor binding to IGHM enhancer 3a
Symbol
tfe3a Nomenclature History
Previous Names
  • cb873 (1)
  • zgc:109815
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Exhibits DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in transcription, DNA-templated. Predicted to localize to nucleoplasm. Human ortholog(s) of this gene implicated in renal cell carcinoma. Is expressed in several structures, including hindbrain neural plate; intermediate cell mass of mesoderm; solid lens vesicle; ventral mesoderm; and yolk syncytial layer. Orthologous to human TFE3 (transcription factor binding to IGHM enhancer 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tfe3a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
renal cell carcinoma Alliance Renal cell carcinoma, papillary, 1 300854
Intellectual developmental disorder, X-linked syndromic, with pigmentary mosaicism and coarse facies 301066
Associated With tfe3a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Domain IPR021802 MiT/TFE transcription factors, C-terminal
Domain IPR031867 MiT/TFE transcription factors, N-terminal
Homologous_superfamily IPR036638 Helix-loop-helix DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Helix-loop-helix DNA-binding domain superfamily MiT/TFE transcription factors, C-terminal MiT/TFE transcription factors, N-terminal Myc-type, basic helix-loop-helix (bHLH) domain
UniProtKB:A0A8M2BE60 442
UniProtKB:Q561Z2 539
UniProtKB:A0A8M2BE83 292
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations