| ZFIN ID: ZDB-GENE-990415-256 |
| Gene Name: | nodal-related 1 |
|---|---|
| Gene Symbol: | ndr1 |
| Previous Names: | Ndr-1, Znr-2, znr2, CHUNP6892, sqt, squint |
| All Expression Data: | 39 figures from 32 publications |
| Wild-type Stages, Structures: | Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult) |
|---|---|
blastodisc,
blastodisc lateral margin,
blastomere,
forerunner cell group
|
|
| Curated Microarray Expression: | GEO (1) |
| Mutant lines: | 28 genotypes |
| Alleles: | cz35, hi975Tg, la021868Tg, ndr1_unspecified |
| Knockdown reagents: |
MO1-ndr1
(1),
MO2-ndr1
(1),
MO3-ndr1
(1),
MO4-ndr1
(1),
MO5-ndr1
(1)
|
| Data: | 9 figures from 7 publications |
| Observed in: |
chorion,
embryonic axis specification,
endoderm endodermal cell,
eye
|
| Phenotype of Human Orthologue | OMIM Phenotype ID |
|---|---|
| Heterotaxy, visceral, 5 | 270100 |
| Ontology | GO Term |
|---|---|
| Biological Process | determination of dorsal identity (more) |
| Cellular Component | extracellular region (more) |
| Molecular Function | growth factor activity (more) |
|
|
|
|
| Tg(ndr1:GFP) |
| ndr1 Contained in: | [BAC] CH211-220B15 (order this), CH211-263M18 (1) (order this) |
| ndr1 Contains: | [SNP] rs3729101 (1), rs3729102 (1) |
| ndr1 Encodes: |
[BAC END]
zk5k12.sp6
[cDNA] MGC:114021 (1) (order this) |
| Type | Accession # | Length (bp/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_130966 (1) | 1480 bp |
Select Tool
|
| Genomic | GenBank:BX530056 (1) | 235804 bp | Blast at MegaBLAST |
| Polypeptide | UniProtKB:Q4V930 (1) | 392 aa |
Select Tool
|
| Sequence Clusters | UniGene:20960 (1) |
|
|
|
|
| Chr: 21, 6 Details | View Map: Merged Individual Panels |
| Evidence | ||||||
|---|---|---|---|---|---|---|
| Species | Symbol | Chromosome (Position) | Accession # | AA | CL | |
| Zebrafish | ndr1 | 21, 6 |
|
|
||
| Human | NODAL | 10 (10q22.1) |
|
|
|
|
| Mouse | Nodal | 10 ( 32.21) |
|
|
|
|
Request: 