Gene

lfng

ID
ZDB-GENE-980605-16
Name
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Symbol
lfng Nomenclature History
Previous Names
  • l-fng (1)
  • id:ibd2614 (1)
  • id:ibd5029 (1)
  • id:ibd5138
  • wu:fc69h02
  • wu:fi34c01 (1)
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity. Involved in fin regeneration; hypochord development; and negative regulation of neuron differentiation. Predicted to localize to integral component of Golgi membrane. Human ortholog(s) of this gene implicated in spondylocostal dysostosis. Is expressed in several structures, including blastodisc; central nervous system; germ ring; neural plate; and sensory system. Orthologous to human LFNG (LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
28 figures from 13 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Nikolaou et al., 2009
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lfng Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
spondylocostal dysostosis 3 Alliance Spondylocostal dysostosis 3, autosomal recessive 609813
Associated With lfng Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003378 Fringe-like, glycosyltransferase domain
Family IPR017374 Fringe
Domain Details Per Protein
Protein Length Fringe Fringe-like, glycosyltransferase domain
UniProtKB:B2GQK5 374
UniProtKB:Q8JHF2 374
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lfng-201 (1) Ensembl 2,987 nt
mRNA lfng-202 (1) Ensembl 492 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations