Gene

zmat3

ID

ZDB-GENE-130530-881

Name

zinc finger, matrin-type 3

Symbol

zmat3 Nomenclature History

Previous Names

zmp:0000000878 (1)

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZMAT3 (zinc finger matrin-type 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Diotel et al., 2015

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zmat3 Human Ortholog

No data available

Associated With zmat3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
Domain	IPR013087	Zinc finger C2H2-type
Family	IPR052644	Zinc finger matrin-type protein 3
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily

Domain Details Per Protein

Protein	Length	Matrin/U1-C-like, C2H2-type zinc finger	Zinc finger C2H2 superfamily	Zinc finger C2H2-type	Zinc finger matrin-type protein 3
UniProtKB:E7EZ09 InterPro	361

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	zmat3-201 (1) Ensembl	Ensembl		1,270 nt	Select Tool
mRNA	zmat3-202 (1) Ensembl	Ensembl		1,017 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations