Gene

selp

ID
ZDB-GENE-110107-2
Name
selectin P
Symbol
selp Nomenclature History
Previous Names
  • si:ch211-260g14.4
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to enable oligosaccharide binding activity and sialic acid binding activity. Acts upstream of or within hematopoietic stem cell migration to bone marrow and hemopoiesis. Predicted to be located in plasma membrane. Predicted to be active in external side of plasma membrane and extracellular space. Is expressed in head; trunk; and vascular cord. Human ortholog(s) of this gene implicated in atopic dermatitis and myocardial infarction. Orthologous to human SELP (selectin P).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Sun et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Esain et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa3047Allele with one point mutationUnknownPremature StopENU
sa23751Allele with one point mutationUnknownSplice SiteENU
sa39288Allele with one point mutationUnknownPremature StopENU
sa43485Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-selpN/AEsain et al., 2015
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Human Disease
Associated With selp Human Ortholog
No data available
Associated With selp Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR018378 C-type lectin, conserved site
Domain IPR000436 Sushi/SCR/CCP domain
Domain IPR000742 EGF-like domain
Domain IPR001304 C-type lectin-like
Domain IPR033991 Selectin, C-type lectin-like domain
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Domain Details Per Protein
Protein Length Complement & Cell Adhesion Regulators C-type lectin, conserved site C-type lectin fold C-type lectin-like C-type lectin-like/link domain superfamily EGF-like domain Selectin, C-type lectin-like domain Selectin superfamily Sushi/SCR/CCP domain Sushi/SCR/CCP superfamily
UniProtKB:E5DV48 868
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA selp-201 (1) Ensembl 2,790 nt
mRNA selp-202 (1) Ensembl 2,611 nt
mRNA selp-204 (1) Ensembl 834 nt
ncRNA selp-002 (1) Ensembl 587 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-260G14ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Species Symbol Chromosome Accession # Evidence
HumanSELP1
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
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