Gene
pamr1b
- ID
- ZDB-GENE-100422-12
- Name
- peptidase domain containing associated with muscle regeneration 1b
- Symbol
- pamr1b Nomenclature History
- Previous Names
-
- pamr1
- si:dkey-234i14.19
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Description
- Predicted to have calcium ion binding activity and serine-type endopeptidase activity. Predicted to be involved in proteolysis. Orthologous to human PAMR1 (peptidase domain containing associated with muscle regeneration 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Lissouba et al., 2018
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000436 | Sushi/SCR/CCP domain |
Domain | IPR000742 | EGF-like domain |
Domain | IPR000859 | CUB domain |
Domain | IPR001254 | Serine proteases, trypsin domain |
Domain | IPR001881 | EGF-like calcium-binding domain |
Family | IPR001314 | Peptidase S1A, chymotrypsin family |
Family | IPR051659 | Serine Protease S1 Domain-Containing Protein |
Homologous_superfamily | IPR009003 | Peptidase S1, PA clan |
Homologous_superfamily | IPR035914 | Spermadhesin, CUB domain superfamily |
Homologous_superfamily | IPR035976 | Sushi/SCR/CCP superfamily |
Homologous_superfamily | IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold |
Domain Details Per Protein
Protein | Length | CUB domain | EGF-like calcium-binding domain | EGF-like domain | Peptidase S1A, chymotrypsin family | Peptidase S1, PA clan | Peptidase S1, PA clan, chymotrypsin-like fold | Serine Protease S1 Domain-Containing Protein | Serine proteases, trypsin domain | Spermadhesin, CUB domain superfamily | Sushi/SCR/CCP domain | Sushi/SCR/CCP superfamily |
---|---|---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:F1QE83
|
1097 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
pamr1b-202
(1)
|
Havana | 4751 nt | |
mRNA |
pamr1b-201
(1)
|
Ensembl | 3294 nt |
Interactions and Pathways
No data available
Plasmids
No data available