ZFIN ID: ZDB-GENE-091014-1
Gene Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b
Gene Symbol: galnt18b
Previous Names: galntl4b, si:ch1073-395o3.1
Location: Chr: 7   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from Nakayama et al., 2014
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  brain, epiphysis, notochord, olfactory bulb (all 8) expand
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH galnt18b HUMAN ORTHOLOG No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein glycosylation (more)
Cellular Component Golgi apparatus (more)
Molecular Function 1,2-dihydroxy-phenanthrene glycosyltransferase activity (more)
GO Terms (all 47)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000772 (1)
  • InterPro:IPR001173 (1)
  • InterPro:IPR029044 (1)
  • PROSITE:PS50231 (1)
  • Pfam:PF00535 (1)
  • Pfam:PF00652 (1)
  • EC:2.4.1.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA galnt18b-001 (1) 2745
    galnt18b-002 (1) 561
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM galnt18b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    galnt18b Contained in: [BAC] CH211-190M1 (1) (order this), CH211-251B22 (1) (order this)
    [Fosmid] CH1073-119O11 (1) (order this), CH1073-387L8 (1) (order this), CH1073-395O3 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009303592 (1) 2666 bp
    Genomic GenBank:AL808121 (1) 154450 bp
    Select Tool
    Polypeptide UniProtKB:E7F4H6 (1) 609 aa
    Sequence Clusters UniGene:87979 (1)
    Sequence Information (all 16)
    OTHER galnt18b GENE PAGES
  • Gene:100310831 (1)
  • VEGA:OTTDARG00000041243 (1)
  • Ensembl(Zv9):ENSDARG00000059438 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish galnt18b 7  
    Human GALNT18 11 (11p15.3)
  • OMIM:615136
  • Gene:374378
  • Orthology Details
    CITATIONS (14)