Gene
tmem240a
- ID
- ZDB-GENE-090313-306
- Name
- transmembrane protein 240a
- Symbol
- tmem240a Nomenclature History
- Previous Names
-
- tmem240
- si:dkey-31b16.9
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Is expressed in female organism. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 21. Orthologous to human TMEM240 (transmembrane protein 240).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Newman et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| spinocerebellar ataxia type 21 | Alliance | Spinocerebellar ataxia 21 | 607454 |
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Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR027947 | TMEM240 family |
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Domain Details Per Protein
| Protein | Additional Resources | Length | TMEM240 family |
|---|---|---|---|
| UniProtKB:E7FFC9 | InterPro | 175 | |
| UniProtKB:A0A8M3B677 | InterPro | 151 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
tmem240a-202
(1)
|
Ensembl | 835 nt | ||
| mRNA |
tmem240a-201
(1)
|
Ensembl | 980 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-31B16 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_009296918 (1) | |||
| Genomic | GenBank:BX957326 (1) | 259092 nt | ||
| Polypeptide | UniProtKB:E7FFC9 (1) | 175 aa |
- Newman, M., Hin, N., Pederson, S., Lardelli, M. (2019) Brain transcriptome analysis of a familial Alzheimer's disease-like mutation in the zebrafish presenilin 1 gene implies effects on energy production. Molecular brain. 12:43
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
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