Gene

clasp1a

ID

ZDB-GENE-081104-520

Name

cytoplasmic linker associated protein 1a

Symbol

clasp1a Nomenclature History

Previous Names

si:dkey-219c10.5

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to have kinetochore binding activity and microtubule plus-end binding activity. Predicted to localize to cytoplasmic microtubule and kinetochore microtubule. Orthologous to human CLASP1 (cytoplasmic linker associated protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With clasp1a Human Ortholog

No data available

Associated With clasp1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR024395	CLASP N-terminal domain
Domain	IPR034085	TOG domain
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold
Repeat	IPR021133	HEAT, type 2

Domain Details Per Protein

Protein	Length	Armadillo-like helical	Armadillo-type fold	CLASP N-terminal domain	HEAT, type 2	TOG domain
UniProtKB:A0A8M9Q4N1 InterPro	1407
UniProtKB:A0A8M3B2T7 InterPro	1478
UniProtKB:A0A8M9QAU3 InterPro	1524
UniProtKB:A0A8M9Q4M7 InterPro	1582
UniProtKB:A0A8M9QFH7 InterPro	1553
UniProtKB:A0A8M9PS63 InterPro	1635
UniProtKB:A0A8M9PS73 InterPro	1601
UniProtKB:A0A8M9QFG7 InterPro	1640
UniProtKB:A0A8M1NG55 InterPro	1534
UniProtKB:A0A8M9QFI0 InterPro	1516
UniProtKB:A0A8M9QJQ9 InterPro	1516
UniProtKB:A0A8M9QJQ3 InterPro	1611
UniProtKB:A0A8M9QAT0 InterPro	1632
UniProtKB:A0A8M3B5S5 InterPro	1561
UniProtKB:A0A8M3AW80 InterPro	1469
UniProtKB:A0A8M9QJQ6 InterPro	1557
UniProtKB:A0A8M6Z096 InterPro	1593
UniProtKB:A0A8M9Q4M3 InterPro	1632
UniProtKB:A0A8M9QFH4 InterPro	1608
UniProtKB:A0A8M9QAT9 InterPro	1565
UniProtKB:A0A8M9PS83 InterPro	1508
UniProtKB:A0A8M9PS68 InterPro	1622
UniProtKB:A0A8M9PS78 InterPro	1533
UniProtKB:A0A8M3BCK2 InterPro	1461
UniProtKB:A0A8M9Q4M8 InterPro	1525
UniProtKB:A0A8M9QFH0 InterPro	1623
UniProtKB:A0A8M9QAT5 InterPro	1616
UniProtKB:A0A8M9Q4M5 InterPro	1619
UniProtKB:A0A8M9QJQ0 InterPro	1631

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	clasp1a-202 (1) Ensembl	Ensembl	896 nt	Select Tool
mRNA	clasp1a-201 (1) Ensembl	Ensembl	4,608 nt	Select Tool ZFIN BLAST
mRNA	clasp1a-203 (1) Ensembl	Ensembl	6,762 nt	Select Tool
mRNA	clasp1a-204 (1) Ensembl	Ensembl	190 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations