Gene
cspg5a
- ID
- ZDB-GENE-080425-4
- Name
- chondroitin sulfate proteoglycan 5a
- Symbol
- cspg5a Nomenclature History
- Previous Names
-
- cspg5
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to be involved in cell projection morphogenesis and trans-synaptic signaling, modulating synaptic transmission. Predicted to act upstream of or within nervous system development. Predicted to be located in membrane. Predicted to be active in synapse. Is expressed in female organism. Orthologous to human CSPG5 (chondroitin sulfate proteoglycan 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Newman et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR009505 | Neural chondroitin sulphate proteoglycan cytoplasmic |
Domain Details Per Protein
| Protein | Length | Neural chondroitin sulphate proteoglycan cytoplasmic |
|---|---|---|
|
UniProtKB:A0A8M3B1Y9
|
533 | |
|
UniProtKB:A0A8M3AQZ1
|
418 | |
|
UniProtKB:A0A8M3ATS5
|
505 | |
|
UniProtKB:A0A8M2B558
|
513 | |
|
UniProtKB:A0A2R8RMD7
|
488 | |
|
UniProtKB:F8W3W2
|
532 | |
|
UniProtKB:A0A8M2B572
|
514 | |
|
UniProtKB:A0A8M9PDU1
|
506 | |
|
UniProtKB:F6PCZ4
|
507 | |
|
UniProtKB:A0A8M2B4N1
|
487 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cspg5a-201
(1)
|
Ensembl | 5,148 nt | ||
| mRNA |
cspg5a-202
(1)
|
Ensembl | 2,265 nt | ||
| mRNA |
cspg5a-204
(1)
|
Ensembl | 5,091 nt | ||
| ncRNA |
cspg5a-002
(1)
|
Ensembl | 1,370 nt |
Interactions and Pathways
No data available
Plasmids
No data available