Gene
kcnc1b
- ID
- ZDB-GENE-080414-3
- Name
- potassium voltage-gated channel, Shaw-related subfamily, member 1b
- Symbol
- kcnc1b Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Description
- Predicted to have delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to localize to several cellular components, including dendrite membrane; neuronal cell body membrane; and voltage-gated potassium channel complex. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 7. Orthologous to human KCNC1 (potassium voltage-gated channel subfamily C member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Safarian et al., 2020
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
progressive myoclonus epilepsy 7 | Alliance | Epilepsy, progressive myoclonic 7 | 616187 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000210 | BTB/POZ domain |
Domain | IPR003131 | Potassium channel tetramerisation-type BTB domain |
Domain | IPR005821 | Ion transport domain |
Family | IPR003968 | Potassium channel, voltage dependent, Kv |
Family | IPR003974 | Potassium channel, voltage dependent, Kv3 |
Family | IPR005403 | Potassium channel, voltage dependent, Kv3.1 |
Homologous_superfamily | IPR011333 | SKP1/BTB/POZ domain superfamily |
Homologous_superfamily | IPR027359 | Voltage-dependent channel domain superfamily |
Domain Details Per Protein
Protein | Length | BTB/POZ domain | Ion transport domain | Potassium channel tetramerisation-type BTB domain | Potassium channel, voltage dependent, Kv | Potassium channel, voltage dependent, Kv3 | Potassium channel, voltage dependent, Kv3.1 | SKP1/BTB/POZ domain superfamily | Voltage-dependent channel domain superfamily |
---|---|---|---|---|---|---|---|---|---|
UniProtKB:F1Q4T7
|
598 | ||||||||
UniProtKB:A0A8M2BLI0
|
594 | ||||||||
UniProtKB:E0R7P7
|
597 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
kcnc1b-201
(1)
|
Havana | 1797 nt |
Interactions and Pathways
No data available
Plasmids
No data available