ZFIN ID: ZDB-GENE-050714-2
Gene Name: cytochrome P450, family 26, subfamily C, polypeptide 1
Gene Symbol: cyp26c1
Previous Names: cyp26b1l, cyp26d1 (1)
Location: Chr: 17   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 16 figures from 12 publications
Wild-type Stages, Structures: Blastula:Sphere (4.0h-4.33h) to Adult (90d-730d, breeding adult)
  anterior lateral plate mesoderm, blastoderm, brain, caudal fin (all 37) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 2 genotypes
Alleles: tpl24Gt
Knockdown reagents: MO1-cyp26c1 (1), MO2-cyp26c1 (1), MO3-cyp26c1 (1), MO4-cyp26c1 (1)
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Focal facial dermal dysplasia 4 614974
GENE ONTOLOGY
Ontology GO Term
Biological Process retinoic acid metabolic process (more)
Molecular Function heme binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001128 (1)
  • InterPro:IPR002401 (1)
  • InterPro:IPR002403 (1)
  • InterPro:IPR017972 (1)
  • PROSITE:PS00086 (1)
  • Pfam:PF00067 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cyp26c1-001 (1) 4032
    antisense ottdart00000055385 (1) 497
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cyp26c1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    cyp26c1 Contained in: [BAC] DKEY-71B20 (1)
    cyp26c1 Encodes: [cDNA] MGC:158120 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001029951 (1) 4034 bp
    Genomic GenBank:CU571091 (1) 75771 bp
    Select Tool
    Polypeptide UniProtKB:A1L1M2 (1) 554 aa
    Sequence Clusters UniGene:46344 (1)
    Sequence Information (all 14)
    OTHER cyp26c1 GENE PAGES
  • Gene:554036 (1)
  • VEGA:OTTDARG00000035081 (1)
  • VEGA:OTTDARG00000038637 (1)
  • Ensembl(Zv9):ENSDARG00000056029 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish cyp26c1 17  
    Human CYP26C1 10 (10q23.33)
  • OMIM:608428
  • Gene:340665
  • Mouse Cyp26c1 19 ( 32.36 cM)
  • MGI:2679699
  • Gene:546726
  • Orthology Details
    CITATIONS (36)