Gene

phf2

ID
ZDB-GENE-050302-10
Name
PHD finger protein 2
Symbol
phf2 Nomenclature History
Previous Names
  • phf8
  • im:4200679
  • wu:fa14c10
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have several functions, including histone demethylase activity (H3-K9 specific); transcription coactivator activity; and transition metal ion binding activity. Predicted to be involved in negative regulation of chromatin silencing at rDNA. Predicted to localize to kinetochore and nucleolus. Orthologous to human PHF2 (PHD finger protein 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With phf2 Human Ortholog
No data available
Associated With phf2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019786 Zinc finger, PHD-type, conserved site
Domain IPR001965 Zinc finger, PHD-type
Domain IPR003347 JmjC domain
Domain IPR019787 Zinc finger, PHD-finger
Domain IPR041070 Jumonji, helical domain
Family IPR050690 JHDM1 Histone Demethylase
Homologous_superfamily IPR011011 Zinc finger, FYVE/PHD-type
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Domain Details Per Protein
Protein Length JHDM1 Histone Demethylase JmjC domain Jumonji, helical domain Zinc finger, FYVE/PHD-type Zinc finger, PHD-finger Zinc finger, PHD-type Zinc finger, PHD-type, conserved site Zinc finger, RING/FYVE/PHD-type
UniProtKB:Q6P949 1063
UniProtKB:A0A8M2BH62 1059
UniProtKB:A0A8M2BGL0 1066
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA phf2-201 (1) Ensembl 5,745 nt
mRNA phf2-202 (1) Ensembl 3,588 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations