Gene

lrrfip1b

ID

ZDB-GENE-050208-324

Name

leucine rich repeat (in FLII) interacting protein 1b

Symbol

lrrfip1b Nomenclature History

Previous Names

si:ch211-186m12.4

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to be involved in regulation of transcription, DNA-templated. Is expressed in female organism. Orthologous to human LRRFIP1 (LRR binding FLII interacting protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Newman et al., 2019

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lrrfip1b Human Ortholog

No data available

Associated With lrrfip1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR019139	Leucine-rich repeat flightless-interacting protein 1/2

Domain Details Per Protein

Protein	Length	Leucine-rich repeat flightless-interacting protein 1/2
UniProtKB:A0A8M2BG03 InterPro	561
UniProtKB:A0A8M2BG13 InterPro	535
UniProtKB:A0A8M9Q6M9 InterPro	576
UniProtKB:A0A8M9Q4H6 InterPro	204
UniProtKB:A0A8M9PMM5 InterPro	543
UniProtKB:A0A8M9PK95 InterPro	241
UniProtKB:A0A8M9PRB2 InterPro	200
UniProtKB:A0A8M9PRA5 InterPro	263
UniProtKB:A0A8M9PXX7 InterPro	248
UniProtKB:A0A8M2BFZ6 InterPro	583
UniProtKB:A0A8M9PEZ3 InterPro	241
UniProtKB:A0A8M9Q8W5 InterPro	247
UniProtKB:A0A8M9Q0A6 InterPro	498
UniProtKB:A0A8M3B3B5 InterPro	508
UniProtKB:A0A8M3B0C1 InterPro	582
UniProtKB:A0A8M2BG01 InterPro	561
UniProtKB:A0A8M9PXY2 InterPro	226
UniProtKB:A0A8M3AT95 InterPro	536
UniProtKB:A0A8M9Q1Y3 InterPro	173
UniProtKB:A0A8M9PRT5 InterPro	232
UniProtKB:A0A8M9QAU2 InterPro	567
UniProtKB:A0A8M9QFV4 InterPro	576
UniProtKB:A0A8M3BAA5 InterPro	539
UniProtKB:A0A8M2BGK9 InterPro	598
UniProtKB:A0A8M9PYK2 InterPro	163
UniProtKB:A0A8M9P950 InterPro	226
UniProtKB:A0A8M3AT96 InterPro	567

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	lrrfip1b-201 (1) Ensembl	Ensembl	2,798 nt	Select Tool
mRNA	lrrfip1b-202 (1) Ensembl	Ensembl	1,434 nt	Select Tool
mRNA	lrrfip1b-203 (1) Ensembl	Ensembl	2,317 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations