Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-041014-323
Gene Name: prostaglandin-endoperoxide synthase 2b
Gene Symbol: ptgs2b
Previous Names: Cox-2b (1), si:dkey-97o5.6
Location: Chr: 20   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
  brain, eye, gill, gut (all 8) expand
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa13114, sa23755
Knockdown reagents: MO1-ptgs2b (1)
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to organic cyclic compound (more)
Molecular Function peroxidase activity (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000742 (1)
  • InterPro:IPR010255 (1)
  • InterPro:IPR019791 (1)
  • InterPro:IPR029576 (1)
  • PROSITE:PS50026 (1)
  • PROSITE:PS50292 (1)
  • Pfam:PF03098 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ptgs2b-001 (1) 2556
    GENE PRODUCT DESCRIPTION No description available
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM ptgs2b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ptgs2b Contained in: [BAC] DKEY-97O5 (1)
    ptgs2b Encodes: [cDNA] MGC:162338 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025504 (1) 2534 bp
    Genomic GenBank:BX323056 (1) 134072 bp
    Select Tool
    Polypeptide UniProtKB:Q5RI06 (1) 606 aa
    Sequence Clusters UniGene:48719 (1)
    Sequence Information (all 16)
    OTHER ptgs2b GENE PAGES
  • Gene:559020 (1)
  • VEGA:OTTDARG00000006192 (1)
  • Ensembl(Zv9):ENSDARG00000010276 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish ptgs2b 20  
    Human PTGS2 1 (1q25.2-q25.3)
  • OMIM:600262
  • Gene:5743
  • Mouse Ptgs2 1 ( 63.84 cM)
  • MGI:97798
  • Gene:19225
  • Orthology Details
    CITATIONS (31)