Gene

sox12

ID
ZDB-GENE-040724-33
Name
SRY-box transcription factor 12
Symbol
sox12 Nomenclature History
Previous Names
  • si:dkey-76p14.4
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in camera-type eye morphogenesis; nervous system development; and regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in telencephalon. Orthologous to human SOX12 (SRY-box transcription factor 12).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Diotel et al., 2015
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa38840Allele with one point mutationUnknownPremature StopENU
sa41833Allele with one point mutationUnknownSplice SiteENU
1 - 2 of 2
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Sequence Targeting Reagents
No data available
Human Disease
Associated With sox12 Human Ortholog
No data available
Associated With sox12 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR009071 High mobility group box domain
Family IPR017386 Transcription factor SOX-12/11/4
Family IPR050140 SRY-related HMG-box transcription factor-like
Homologous_superfamily IPR036910 High mobility group box domain superfamily
1 - 4 of 4
Domain Details Per Protein
Protein Length High mobility group box domain High mobility group box domain superfamily SRY-related HMG-box transcription factor-like Transcription factor SOX-12/11/4
UniProtKB:Q7SZW4 355
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 11
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sox12-201 (1) Ensembl 3,955 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-76P14
1 - 1 of 1
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSOX1220
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseSox122
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
1 - 5 of 5
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