Gene

pbdc1

ID

ZDB-GENE-040718-459

Name

polysaccharide biosynthesis domain containing 1

Symbol

pbdc1 Nomenclature History

Previous Names

cb679 (1)
fc12c03
sb:cb679
wu:fc12c03
zgc:92611

Type

protein_coding_gene

Location

Chr: 10 Mapping Details/Browsers

Description

Is expressed in several structures, including immature eye; mesoderm; midbrain; musculature system; and sensory system. Orthologous to human PBDC1 (polysaccharide biosynthesis domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2001

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb679 (19 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pbdc1 Human Ortholog

No data available

Associated With pbdc1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR008476	Protein PBDC1, metazoa/fungi
Homologous_superfamily	IPR023139	PBDC1-like domain superfamily

Domain Details Per Protein

Protein	Length	PBDC1-like domain superfamily	Protein PBDC1, metazoa/fungi
UniProtKB:Q6DH77 InterPro	173

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	pbdc1-202 (1) Ensembl	Ensembl	1,318 nt	Select Tool ZFIN BLAST
mRNA	pbdc1-203 (1) Ensembl	Ensembl	740 nt	Select Tool ZFIN BLAST
ncRNA	pbdc1-002 (1) Ensembl	Ensembl	859 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations