Gene

smox

ID

ZDB-GENE-031201-3

Name

spermine oxidase

Symbol

smox Nomenclature History

Previous Names

cb1027 (1)
wu:fq32f10
zgc:77167

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have polyamine oxidase activity. Involved in hemopoiesis. Is expressed in several structures, including anterior axial hypoblast; blood vessel; mesoderm; nervous system; and pancreatic system. Orthologous to human SMOX (spermine oxidase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

11 figures from 3 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

cb1027 (14 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Tijssen et al., 2011
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With smox Human Ortholog

No data available

Associated With smox Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002937	Amine oxidase
Homologous_superfamily	IPR036188	FAD/NAD(P)-binding domain superfamily

Domain Details Per Protein

Protein	Length	Amine oxidase	FAD/NAD(P)-binding domain superfamily
UniProtKB:A0A8M6Z453 InterPro	326
UniProtKB:B8A458 InterPro	539

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	smox-205 (1) Ensembl	Havana	965 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	smox-201 (1) Ensembl	Havana	2220 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	smox-002 (1) Ensembl	Havana	1902 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	smox-003 (1) Ensembl	Havana	836 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	smox-004 (1) Ensembl	Havana	774 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations