Gene
pabpc4
- ID
- ZDB-GENE-030131-9663
- Name
- poly(A) binding protein, cytoplasmic 4 (inducible form)
- Symbol
- pabpc4 Nomenclature History
- Previous Names
-
- cb12 (1)
- sb:cb12
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Predicted to have mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Predicted to localize to several cellular components, including cytoplasmic stress granule; cytosol; and ribonucleoprotein complex. Is expressed in eye; musculature system; solid lens vesicle; and somite. Orthologous to several human genes including PABPC4 (poly(A) binding protein cytoplasmic 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 17 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb12 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR002004 | Polyadenylate-binding protein/Hyperplastic disc protein |
Domain | IPR003954 | RNA recognition motif domain, eukaryote |
Domain | IPR034364 | PABP, RNA recognition motif 1 |
Domain | IPR045305 | PABP, RNA recognition motif 2 |
Family | IPR006515 | Polyadenylate binding protein, human types 1, 2, 3, 4 |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Homologous_superfamily | IPR036053 | PABC (PABP) domain |
Domain Details Per Protein
Protein | Length | Nucleotide-binding alpha-beta plait domain superfamily | PABC (PABP) domain | PABP, RNA recognition motif 1 | PABP, RNA recognition motif 2 | Polyadenylate binding protein, human types 1, 2, 3, 4 | Polyadenylate-binding protein/Hyperplastic disc protein | RNA-binding domain superfamily | RNA recognition motif domain | RNA recognition motif domain, eukaryote |
---|---|---|---|---|---|---|---|---|---|---|
UniProtKB:Q7T3G5
|
637 | |||||||||
UniProtKB:A0A8M9PE33
|
632 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
pabpc4-201
(1)
|
Havana | 2204 nt | |
mRNA |
pabpc4-202
(1)
|
Ensembl | 4220 nt |
Interactions and Pathways
No data available
Plasmids
No data available