Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-030131-7742
Gene Name: superoxide dismutase 2, mitochondrial
Gene Symbol: sod2
Previous Names: Mn-SOD (1), sod(Mn) (1), cb463 (1), wu:fj33b01
GENE EXPRESSION
All Expression Data: 16 figures from 11 publications
Directly Submitted Expression Data: 3 figures (6 images) from Thisse et al., 2001 [cb463]
Wild-type Stages, Structures: Pharyngula:Prim-15 (30.0h-36.0h) to Adult (90d-730d, breeding adult)
  brain, gill, liver, muscle (all 11) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS No data available
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
{Microvascular complications of diabetes 6} 612634
GENE ONTOLOGY
Ontology GO Term
Biological Process response to methylmercury (more)
Molecular Function metal ion binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001189 (1)
  • InterPro:IPR019831 (1)
  • InterPro:IPR019832 (1)
  • InterPro:IPR019833 (1)
  • PROSITE:PS00088 (1)
  • Pfam:PF00081 (1)
  • Pfam:PF02777 (1)
  • EC:1.15.1.1 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sod2-001 (1) 956
    ncRNA sod2-002 (1) 644
    sod2-003 (1) 982
    sod2-004 (1) 780
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM sod2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    sod2 Contained in: [BAC] CH211-195E3 (1) (order this)
    sod2 Encodes: [EST] cb463 (1), fj33b01
    [cDNA] MGC:73051 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199976 (1) 979 bp
    Genomic GenBank:AL929182 (1) 225515 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q2TV65 (1) 224 aa
    Sequence Clusters UniGene:6314 (1)
    Sequence Information (all 16)
    OTHER sod2 GENE PAGES
  • Gene:335799 (1)
  • VEGA:OTTDARG00000005559 (1)
  • Ensembl(Zv9):ENSDARG00000042644 (1)
  • MAPPING INFORMATION
    Chr: 20 Details
    ORTHOLOGY
      Evidence
    Species Symbol Chromosome (Position) Accession # AA CL
    Zebrafish sod2 20  
    Human SOD2 6 (6q25.3)
  • OMIM:147460
  • Gene:6648
  • CITATIONS (44)