Gene

rbm38

ID
ZDB-GENE-030131-5923
Name
RNA binding motif protein 38
Symbol
rbm38 Nomenclature History
Previous Names
  • fi25e12
  • rnpc1 (1)
  • wu:fi25e12
  • zgc:92336
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have mRNA binding activity. Predicted to be involved in mRNA processing and regulation of RNA metabolic process. Predicted to localize to cytosol; nucleus; and ribonucleoprotein complex. Orthologous to human RBM38 (RNA binding motif protein 38).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Shao et al., 2020
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rbm38 Human Ortholog
No data available
Associated With rbm38 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Family IPR050886 RNA-binding_regulatory_proteins
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA-binding_regulatory_proteins RNA recognition motif domain
UniProtKB:A8KBR7 234
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rbm38-201 (1) Ensembl 2,393 nt
mRNA rbm38-202 (1) Ensembl 877 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations