Gene

ell2

ID
ZDB-GENE-030131-1717
Name
elongation factor for RNA polymerase II 2
Symbol
ell2 Nomenclature History
Previous Names
  • cb244 (1)
  • fb78f03
  • im:3814960
  • sb:cb244
  • wu:fb78f03 (1)
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to be involved in transcription elongation from RNA polymerase II promoter. Predicted to localize to transcription elongation factor complex. Is expressed in several structures, including anterior axial hypoblast; hatching gland; mesoderm; musculature system; and sensory system. Orthologous to human ELL2 (elongation factor for RNA polymerase II 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2001
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ell2 Human Ortholog
No data available
Associated With ell2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR010844 Occludin homology domain
Domain IPR019464 RNA polymerase II elongation factor ELL, N-terminal
Family IPR031176 ELL/occludin family
Homologous_superfamily IPR036390 Winged helix DNA-binding domain superfamily
Homologous_superfamily IPR042065 E3 ubiquitin-protein ligase ELL-like
Domain Details Per Protein
Protein Length E3 ubiquitin-protein ligase ELL-like ELL/occludin family Occludin homology domain RNA polymerase II elongation factor ELL, N-terminal Winged helix DNA-binding domain superfamily
UniProtKB:A0A8M9PI38 338
UniProtKB:Q5U3C7 626
UniProtKB:F1R2K7 655
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ell2-201 (1) Ensembl 396 nt
mRNA ell2-202 (1) Ensembl 4,251 nt
ncRNA ell2-002 (1) Ensembl 612 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations