ZFIN ID: ZDB-GENE-020419-37
Gene Name: UDP-glucuronate decarboxylase 1
Gene Symbol: uxs1
Previous Names: CHUNP6891, fj36b08, wu:fj36b08 (1), zgc:91980 (1)
Location: Chr: 9   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:91980]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  basal plate cartilage, brain, ceratobranchial cartilage, ceratohyal cartilage (all 15) expand
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 14 genotypes
Alleles: hi3357Tg, hi954Tg, sa18492, w60
PHENOTYPE
Data: 19 figures from 8 publications
Observed in: cartilage element, cell junction organization, ceratobranchial 5 bone, ceratobranchial cartilage (all 47) expand
GENE ONTOLOGY
Ontology GO Term
Biological Process chondroitin sulfate proteoglycan biosynthetic process (more)
Cellular Component Golgi apparatus (more)
Molecular Function UDP-glucuronate decarboxylase activity (more)
GO Terms (all 18)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001509 (1)
  • InterPro:IPR016040 (1)
  • InterPro:IPR021761 (1)
  • Pfam:PF01370 (1)
  • Pfam:PF11803 (1)
  • EC:4.1.1.35 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA uxs1-001 (1) 2432
    uxs1-002 (1) 553
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM uxs1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    uxs1 Contained in: [BAC] CH73-385G5 (1) (order this)
    [Fosmid] CH1073-45B16 (1) (order this), CH1073-270F2 (1) (order this)
    uxs1 Encodes: [BAC END] zk16c14.sp6
    [EST] fj36b08 (1)
    [cDNA] MGC:91980 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173242 (1) 2168 bp
    Genomic GenBank:CU855778 (1) 81313 bp
    Select Tool
    Polypeptide UniProtKB:Q6GMI9 (1) 418 aa
    Sequence Clusters UniGene:79684 (1)
    Sequence Information (all 18)
    OTHER uxs1 GENE PAGES
  • Gene:192315 (1)
  • VEGA:OTTDARG00000033910 (1)
  • Ensembl(Zv9):ENSDARG00000056102 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA NT
    Zebrafish uxs1 9  
    Human UXS1 2 (2q12.2)
  • OMIM:609749
  • Gene:80146
  • Mouse Uxs1 1 ( 23.46 cM)
  • MGI:1915133
  • Gene:67883
  • Orthology Details
    CITATIONS (32)