ZFIN Sequences for Gene: gpc6a

ZFIN ID: ZDB-GENE-071004-15

ZFIN ID: ZDB-GENE-071004-15

SEQUENCE INFORMATION

Gene Name:	glypican 6a
Gene Symbol:	gpc6a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001109719 (1)	2061 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021475731 (1)	2401 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQQ01005705 (1)	2166 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC151902 (1)	2061 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:KC999394 (1)	1689 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CU986306 (2)	82823 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP067412 (2)	33219 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU929355 (2)	31574 nt	Select Tool MegaBLAST Ensembl
	GenBank:CABZ01054431 (1)	27139 nt	Select Tool MegaBLAST Ensembl
	GenBank:FP236171 (1)	26346 nt	Select Tool MegaBLAST Ensembl
	GenBank:CABZ01086398 (1)	26013 nt	Select Tool MegaBLAST Ensembl
	GenBank:CABZ01054428 (1)	21319 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086388 (1)	18158 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054426 (1)	12957 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086393 (1)	12453 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054408 (1)	10683 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086390 (1)	9106 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086396 (1)	7585 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054423 (1)	7396 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086385 (1)	7333 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054422 (1)	6022 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054421 (1)	6015 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086389 (1)	5931 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086383 (1)	5776 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086394 (1)	5234 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086391 (1)	5215 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054425 (1)	3775 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086397 (1)	3415 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086395 (1)	3372 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086384 (1)	3135 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086392 (1)	2000 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054427 (1)	1999 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054407 (1)	1985 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054430 (1)	1860 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054429 (1)	1828 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054406 (1)	1598 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086387 (1)	1445 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01054424 (1)	1317 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086386 (1)	1099 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01086382 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A7MBT1 (1)	562 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q7F3 (1)	552 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001103189 (1)	562 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021331406 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAI51903 (1)	562 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AHA87028 (1)	562 aa	Select Tool ZFIN BLAST NCBI BLAST

gpc6a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-271A5 (1)	Genomic	GenBank:CU986306	82823	Select Tool MegaBLAST Ensembl
[BAC] CH73-380P12 (1)	Genomic	GenBank:FP067412	33219	Select Tool MegaBLAST Ensembl
[FOSMID] CH1073-86A3 (1)	Genomic	GenBank:CU929355	31574	Select Tool MegaBLAST Ensembl

gpc6a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:171629 (1)	RNA	GenBank:BC151902	2061	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI51903	562	Select Tool ZFIN BLAST NCBI BLAST