ZFIN Sequences for Gene: smarca1

ZFIN ID: ZDB-GENE-070705-296

ZFIN ID: ZDB-GENE-070705-296

SEQUENCE INFORMATION

Gene Name:	SNF2 related chromatin remodeling ATPase 1
Gene Symbol:	smarca1

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001099997 (1)	3111 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005165157 (1)	3772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073950525 (1)	3707 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01018336 (1)	3855 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EH439517 (1)	890 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CN511498 (1)	840 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CN014285 (1)	826 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK029415 (1)	814 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI878747 (1)	737 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CF999037 (1)	726 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI877215 (1)	648 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CT708620 (1)	605 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB901234 (1)	605 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CD284571 (1)	599 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB933263 (1)	584 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AL925786 (1)	533 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI674000 (1)	493 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB926376 (1)	442 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK714515 (1)	182 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR848717 (1)	207800 nt	Blast at MegaBLAST
	GenBank:CU104724 (1)	48842 nt	Select Tool MegaBLAST Ensembl
	GenBank:FI495149 (1)	227 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:JBMGRA010000005 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A5WUY4 (1)	1036 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BCD5 (1)	1015 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58JJH5 (1)	931 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001093467 (1)	1036 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005165214 (1)	1015 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073806626 (1)	931 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast

smarca1 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-149C21 (1)	Genomic	GenBank:CU104724	48842	Select Tool MegaBLAST Ensembl
[BAC] DKEY-148B12 (1)	Genomic	GenBank:CR848717	207800	Blast at MegaBLAST

smarca1 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] eu2488 (1)	Genomic	GenBank:FI495149	227	Select Tool ZFIN BLAST NCBI BLAST Ensembl