ZFIN Sequences for Gene: col6a3

ZFIN ID: ZDB-GENE-070501-8

ZFIN ID: ZDB-GENE-070501-8

SEQUENCE INFORMATION

Gene Name:	collagen, type VI, alpha 3
Gene Symbol:	col6a3

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_073912683 (1)	42456 nt	Select Tool MegaBLAST Ensembl
	RefSeq:XM_073912684 (1)	41874 nt	Select Tool MegaBLAST Ensembl
	RefSeq:XM_073912685 (1)	41280 nt	Select Tool MegaBLAST Ensembl
	GenBank:GFIL01004517 (1)	10323 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01007300 (1)	1066 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EE720181 (1)	893 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EE311796 (1)	812 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DT055815 (1)	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK028912 (1)	763 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CF997660 (1)	752 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:DT077929 (1)	729 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB897923 (1)	649 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BQ258860 (1)	629 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BI840494 (1)	571 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI397185 (1)	503 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW466707 (1)	483 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI385056 (1)	435 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:EB864182 (1)	245 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CR545476 (1)	202562 nt	Blast at MegaBLAST
	GenBank:JBMGRA010000009 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0AC58GGD6 (1)	13818 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58GGC5 (1)	13624 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58GGC8 (1)	13426 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32TMZ5 (1)	12825 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32U315 (1)	12798 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AB32TJA3 (1)	12763 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6Z0G5 (1)	10986 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9QFY4 (1)	10959 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M6Z141 (1)	10924 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9Q514 (1)	10897 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:XP_073768784 (1)	13818 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073768785 (1)	13624 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073768786 (1)	13426 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast

col6a3 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] DKEYP-74A11 (2)	Genomic	GenBank:CR545476	202562	Blast at MegaBLAST

col6a3 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[EST] faa27f02 (1)	RNA	GenBank:BQ258860	629	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fb06e12 (1)	RNA	GenBank:AI397185	503	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI385056	435	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fs74g09	RNA	GenBank:BI840494	571	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT