ZFIN Sequences for Gene: kcnc1a

ZFIN ID: ZDB-GENE-061220-10

ZFIN ID: ZDB-GENE-061220-10

SEQUENCE INFORMATION

Gene Name:	potassium voltage-gated channel, Shaw-related subfamily, member 1a
Gene Symbol:	kcnc1a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001128725 (1)	2017 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005168893 (1)	4675 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073906868 (1)	4576 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005168895 (1)	3661 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073906869 (1)	3562 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005168894 (1)	2763 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012382476 (1)	7219 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XR_012382477 (1)	7120 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01013764 (1)	8656 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC163441 (1)	2017 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC163444 (1)	2017 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BK007871 (1)	1830 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BK007872 (1)	1755 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX284688 (1)	236784 nt	Blast at MegaBLAST
	GenBank:BX571811 (2)	219044 nt	Blast at MegaBLAST
	GenBank:BX001042	168195 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU570985 (2)	59706 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000007 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:E0R7P5 (1)	609 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PP12 (1)	606 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:B3DJD2 (1)	605 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M2BG67 (1)	599 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:E0R7P6 (1)	584 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58FZL5 (1)	576 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0AC58FZM8 (1)	551 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001122197 (1)	605 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005168950 (1)	609 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005168951 (1)	599 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005168952 (1)	584 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073762969 (1)	576 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073762970 (1)	551 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:DAA33891 (1)	609 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI63441 (1)	605 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI63444 (1)	605 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:DAA33892 (1)	584 aa	Select Tool ZFIN BLAST NCBI BLAST

kcnc1a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-325G8 (1)	Genomic	GenBank:CU570985	59706	Select Tool MegaBLAST Ensembl
[BAC] CH211-146D6 (1)	Genomic	GenBank:BX001042	168195	Select Tool MegaBLAST Ensembl
[BAC] CH211-194P6 (1)	Genomic	GenBank:BX571811	219044	Blast at MegaBLAST

kcnc1a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:194940 (1)	RNA	GenBank:BC163441	2017	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI63441	605	Select Tool ZFIN BLAST NCBI BLAST
[CDNA] MGC:194950 (1)	RNA	GenBank:BC163444	2017	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI63444	605	Select Tool ZFIN BLAST NCBI BLAST