ZFIN ID: ZDB-GENE-061220-10
Gene Name: potassium voltage-gated channel, Shaw-related subfamily, member 1a
Gene Symbol: kcnc1a    Nomenclature History

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Previous Names: kcnc1, zgc:194940, zgc:194950

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to localize to several cellular components, including dendrite membrane; neuronal cell body membrane; and voltage-gated potassium channel complex. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 7. Orthologous to human KCNC1 (potassium voltage-gated channel subfamily C member 1).
Genome Resources: Alliance (1),  Gene:565419 (1),  Ensembl(GRCz11):ENSDARG00000051852 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20986 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH kcnc1a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    progressive myoclonus epilepsy 7 Alliance Epilepsy, progressive myoclonic 7 616187
    DISEASE ASSOCIATED WITH kcnc1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ion transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ion channel activity (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA kcnc1a-201 (1)    Ensembl 6573
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM kcnc1a No data available
    MARKER RELATIONSHIPS
    kcnc1a Contained in: [BAC] CH73-325G8 (1), CH211-146D6, CH211-194P6 (1)
    kcnc1a Encodes: [cDNA] MGC:194940 (1), MGC:194950 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001128725 (1) 2017 nt
    Genomic GenBank:BX571811 (1) 219044 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E0R7P5 (1) 609 aa
    Sequence Information (all 30)
    ORTHOLOGY for kcnc1a ( Chr: 7 )
    CITATIONS (21)